Plots difference or similarity map

Usage

plotDS(
  XPred,
  estType = "mean",
  estQuantile = 0.95,
  type = "similarity",
  independent = "",
  rangex = range(XPred$Longitude, na.rm = TRUE),
  rangey = range(XPred$Latitude, na.rm = TRUE),
  rangez = range(XPred$Est, na.rm = TRUE),
  contourType = c("filled.contour", "contour"),
  showModel = TRUE,
  showScale = TRUE,
  ncol = 10,
  colors = "RdYlGn",
  centerMap = "Europe",
  reverseColors = FALSE,
  terrestrial = 1,
  grid = TRUE,
  arrow = TRUE,
  scale = TRUE,
  simValues = NULL,
  showValues = FALSE,
  dataCenter = NULL,
  RadiusBatch = NULL,
  titleMain = TRUE,
  titleScale = TRUE,
  setAxisLabels = FALSE,
  mainLabel = "",
  yLabel = "Latitude",
  xLabel = "Longitude",
  scLabel = "",
  northSize = 0.2,
  scalSize = 0.1,
  scaleX = 0,
  scaleY = 0.1,
  NorthX = 0.025,
  NorthY = 0.925,
  AxisSize = 1,
  AxisLSize = 1,
  pointDat = NULL
)

Arguments

XPred: return object of similarityMap or createDifferenceMap functions
estType: one of "Mean", "SE" and "Quantile". defaults to "Mean"
estQuantile: quantile (only applicable if estType = "Quantile")
type: one of "similarity" or "difference" determining the type of map
independent: name of independent variable shown in plot
rangex: range of longitude values (x axis limits)
rangey: range of latitude values (y axis limits)
rangez: range of estimated values (z axis limits)
contourType: one of "filled.contour" or "contour"
showModel: show model
showScale: show colour scale
ncol: number of colors for estimates
colors: color scheme of estimates from RColorBrewer. defaults to "RdYlGn"
centerMap: center of map, one of "Europe" and "Pacific"
reverseColors: inverse colour scheme
terrestrial: show only estimates on land masses (1), oceans (-1) or all (0)
grid: show coordinate grid TRUE/FALSE
arrow: display north arrow TRUE/FALSE
scale: display scale TRUE/FALSE
simValues: if showValues: list of simulated values
showValues: boolean show values in plot?
dataCenter: data for batch estimation
RadiusBatch: radius
titleMain: show main title
titleScale: show scale title
setAxisLabels: show axis/main/scale labels
mainLabel: main label
yLabel: y lab label
xLabel: y lab label
scLabel: scale lab labels
northSize: size of north arrow
scalSize: size of scale
scaleX: scale x orientation
scaleY: scale y orientation
NorthX: north arrow x orientation
NorthY: north arrow y orientation
AxisSize: axis title font size
AxisLSize: axis label font size
pointDat: data frame of points to add to plot