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All functions

addCentroids()
Add centroid of clusters
addFormattedAxis()
Add Formatted Axis
add_borders()
Add borders layer (generic)
add_center_line()
Add center line (generic)
add_coast()
Add coastline layer (generic)
add_grids()
Add grid lines layer (generic)
add_land()
Add land layer (generic)
add_ocean()
Add ocean layer (generic)
augmentData()
Augment Data
centerData()
Center Data
cleanup(<PlotSeriesExport>)
Clean up the PlotSeriesExport object
clusterMethodUI()
Cluster Method UI
config()
Config
convertLatLongWrapper()
Convert Lat Long Wrapper
createDuplicateModal()
Creates a modalDialog for detectDuplicates module
createPchPoints()
Create PCH Points
createPchPointsVec()
Create PCH Points Vector
customizeLeafletMap()
Customize Leaflet Map
datTable()
Create data table
dataExplorerServer()
server funtion of data explorer module
dataExplorerUI()
ui function of dataExplorer module
detectDuplicatesServer()
detectDuplicates module server
detectDuplicatesUI()
detectDuplicates module ui
downloadDSSMModelUI()
Download DSSM Model UI
draw()
draw Interactive Map
drawFittedBounds()
Draw Fitted Bounds
estimateMap()
Estimates spatial average model with (optional) random effects (GAMM /Generalized Additive Mixed Model)
estimateMap3D()
Estimates spatio-temporal average model with (optional) random effects (GAMM /Generalized Additive Mixed Model)
estimateMap3DKernel()
Estimates spatio-temporal kernel density model
estimateMapKernel()
Estimates spatial kernel density model
estimateMapSpread()
Estimates spatial spread model (first or latest occurence of event)
exportCSV()
Export to csv
exportFilename()
Filename of Export
exportJSON()
Export to json
exportMapR(<PlotSeriesExport>)
Export the series of plots for MapR
exportSeries(<PlotSeriesExport>)
Export the series of plots to files or a GIF
exportXLSX()
Export to xlsx
extractCenterEstimates()
Extract Center Estimates
extractChoicesFromIsomemoApi()
Extract Choices From Isomemo Api
extractMaskDraw()
Extract Mask Draw
extractXPredCenter()
Extract XPred Center
filled.contour2()
Filled Countour 2 Wrapper for contour plot
filterCoordCircle()
Filter Coord Circle
filterCoordRectangle()
Filter Coord Rectangle
filterCoordSquare()
Filter Coord Square
filterT()
Filter Time
findDuplicates()
Finds duplicates in data using user specified similarity rules
generate(<PlotSeriesExport>)
Generate the series of plots and save them to files This function iterates over the specified time points, calls the plotting function for each time point, and saves the plots in the specified format.
getAppTitle()
Get App Title
getCoordCenter()
Get Coord Center
getCostSpeed()
Get Speed or Cost object for Cost-Surface and least-cost path
getDefaultCoordColumn()
Get Default Coord Column
getFullCoordGrid()
Get Full Coord Grid
getHTMLFromPath()
Get HTML from path
getHrefTag()
Get Href
getPColor()
Get Point Color
getPointSize()
Get Point Size
getPointSymbols()
Get Point Size
interactiveMap()
server funtion of interactive map module
interactiveMapUI()
ui function of interactiveMap module
isOnlyDataSearchMode()
Is Only Data SEARCH
jitter_latlong()
Jitter latitude and longitude coordinates
joinCentroidData()
Join centroid data to data
leafletExport()
server funtion of leaflet map export module
leafletExportButton()
ui function of leaflet map export module
leafletPointSettingsServer()
server funtion of leaflet point settings module
leafletPointSettingsUI()
ui function of leaflet point settings module
leafletSettings()
server funtion of leaflet settings module
leafletSettingsUI()
ui function of leaflet settings module
length_of_degree()
Length of a degree of latitude or longitude
loadMaps()
loadMaps
locationFieldsServer()
Location Fields Server
locationFieldsUI()
Location Fields UI
makeClusterIdsContinuous()
Make cluster ids continuous
mapDiff()
server function of model Results module
mapSim()
server function of model Results module
modelLinkUI()
ui function to display a download link
modelResults2D()
server function of model Results module
modelResults2DKernel()
server function of model Results module
modelResults2DKernelUI()
ui function of modelResults2DKernel module
modelResults2DUI()
ui function of modelResults2D module
modelResults3D()
server function of model Results module
modelResults3DKernel()
server function of model Results module
modelResults3DKernelUI()
ui function of modelResults3DKernel module
modelResults3DUI()
ui function of modelResults3D module
modelResultsAssign()
server function of model Results module
modelResultsAssignUI()
ui function of modelResultsAssignR module
modelResultsDiffUI()
ui function of modelResultsDiffSim module (OperateR)
modelResultsSimUI()
ui function of modelResultsDiffSim module (LocateR)
modelResultsSpread()
server function of model Results module
modelResultsSpreadUI()
ui function of modelResultsSpread module
new_MapLayers()
MapLayers S3 Class
new_NorthArrow()
North Arrow for Interactive Maps
new_PlotSeriesExport()
PlotSeriesExport Class
new_ScaleBar()
ScaleBar Class
numericInputLatAndLongServer()
Numeric Input Lat And Long Server
numericInputLatAndLongUI()
Numeric Input Lat And Long UI
plot(<MapLayers>)
Draw all map layers
plotDS()
Plots difference or similarity map
plotMap()
Plots map of a spatial average or spread model from estimateMap() or estimateMapSpread() functions
plotMap3D()
Plots time slice map of a spatio-temporal model from estimateMap3D() function
plotTimeCourse()
Plots time course map of a spatio-temporal model from estimateMap3D() function
pointColourServer()
server funtion of leaflet point settings module
pointColourUI()
ui function of leaflet point settings module
pointSizeServer()
server funtion of leaflet point settings module
pointSizeUI()
ui function of leaflet point settings module
pointSymbolServer()
server function of leaflet point symbol settings module
pointSymbolUI()
ui function of leaflet point symbol settings module
prepareDate()
Prepare Date
print(<PlotSeriesExport>)
Print method for PlotSeriesExport objects This method provides a summary of the PlotSeriesExport object.
putNewLatLongToBegin()
Put Lat Long To Begin
reSourcesInstalled()
Check Availability for ReSources package
removeDataOutsideRestriction()
Remove Data Outside Restriction
removeOldIcons()
Remove Old Icons
savedMapsExportButton()
Saved Maps Export Button
savedMapsExportServer()
Saved Maps Export Server
savedMapsTab()
server function of saved maps module
savedMapsTabUI()
ui function of saved maps module
selectClusterGrouping()
Select Cluster Grouping
set(<NorthArrow>)
Set North Arrow on a Leaflet Map
set()
Generic function for setting values in an object
set(<ScaleBar>)
Set Scale Bar on Leaflet Map
setColorLegend()
Set Colour Legend
shiftDataToDefaultRestriction()
Shift Data To Default Restriction
setSkin() getSkin() allowedSkins()
Skin helper functions
sliderAndNumericInputServer()
Slider And Input Server
sliderAndNumericInputUI()
Slider And Input UI
smoothingServer()
Smoothing Server
smoothingUI()
Smoothing UI
startApplication()
Start Application
updateDataOnLeafletMap()
Update Data On Map