Package index • PEITHO

All functions

as.data.frame(<workflow>): Convert a workflow object to a data frame
as.data.frame(<workflowrun>): Convert a workflowrun object to a data frame
as.data.frame(<workflowstate>): Convert a workflowstate to a data frame
extract_inputs(): Extract input values from a workflow run
extract_workflow_from_files(): Extract workflow steps from files in a folder
fetch_WebText(): Fetch and parse web text from a URL
import_workflow(): Import workflow from a ZIP file
new_WebText(): WebText Class Represents text content fetched from a web page.
new_operationparam(): Create a new operation parameter object
new_workflow(): Create a new workflow object
new_workflowrun(): Workflow run object
new_workflowstate(): Create a new workflow state object
new_workflowstep(): Create a new workflow step object
new_workflowsteprun(): Create a new workflow step run object
`%||%`: Null coalescing operator Returns left value if not NULL, otherwise right value.
print(<operationparam>): Print method for operationparam objects
print(<workflow>): Print method for workflow objects
print(<workflowrun>): Print method for workflowrun objects
print(<workflowstate>): Print method for workflowstate objects
print(<workflowstep>): Print method for workflowstep objects
print(<workflowsteprun>): Print method for workflowsteprun objects
run(): Run a workflow step This is a generic function to run a workflow step or an entire workflow.
run(<workflow>): Run the entire workflow
run(<workflowstep>): Run a workflow step
save_as_zip(): Save an object as a ZIP file
save_as_zip(<workflow>): Save workflow as a ZIP file
startApplication(): Start Application
summary(<workflowsteprun>): Summary method for workflowsteprun objects
update(): Update a workflow state after running a step
update(<workflowstate>): Add a workflow step run to the workflow state
workflow_file_paths(): Helper to get file paths for PEITHO workflow files